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  5. Pp3c11_8520V3.1

Pp3c11_8520V3.1


Description : Coatomer, beta\ subunit


Gene families : OG0002594 (Archaeplastida) Phylogenetic Tree(s): OG0002594_tree ,
OG_05_0002769 (LandPlants) Phylogenetic Tree(s): OG_05_0002769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_8520V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00013680 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.13 Archaeplastida
AT1G79990 No alias structural molecules 0.09 Archaeplastida
AT3G15980 No alias Coatomer, beta' subunit 0.06 Archaeplastida
Cpa|evm.model.tig00020903.33 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
Cre02.g118500 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 Archaeplastida
GSVIVT01017121001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.09 Archaeplastida
Gb_26317 No alias subunit beta2 of coat protein complex 0.07 Archaeplastida
LOC_Os02g11830.2 No alias subunit beta2 of coat protein complex 0.06 Archaeplastida
LOC_Os02g11840.1 No alias subunit beta2 of coat protein complex 0.04 Archaeplastida
MA_10436968g0010 No alias peroxisomal polyamine oxidase (PAO2/3/4). subunit beta2... 0.05 Archaeplastida
Mp3g04060.1 No alias subunit beta2 of coat protein complex 0.09 Archaeplastida
Solyc03g120270.4.1 No alias subunit beta2 of coat protein complex 0.12 Archaeplastida
Solyc06g066730.3.1 No alias subunit beta2 of coat protein complex 0.08 Archaeplastida
Solyc12g043000.3.1 No alias subunit beta2 of coat protein complex 0.1 Archaeplastida
Zm00001e014494_P001 No alias subunit beta2 of coat protein complex 0.15 Archaeplastida
Zm00001e024969_P001 No alias subunit beta2 of coat protein complex 0.14 Archaeplastida
Zm00001e030001_P002 No alias subunit beta2 of coat protein complex 0.14 Archaeplastida
Zm00001e036524_P002 No alias subunit beta2 of coat protein complex 0.03 Archaeplastida
Zm00001e037375_P002 No alias subunit beta2 of coat protein complex 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!