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  5. Pp3c12_23510V3.1

Pp3c12_23510V3.1


Description : Vps51/Vps67 family (components of vesicular transport) protein


Gene families : OG0004578 (Archaeplastida) Phylogenetic Tree(s): OG0004578_tree ,
OG_05_0005242 (LandPlants) Phylogenetic Tree(s): OG_05_0005242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_23510V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
Gb_16420 No alias component VPS51/UNH of GARP/EARP... 0.06 Archaeplastida
LOC_Os03g52770.1 No alias component VPS51/UNH of GARP/EARP... 0.12 Archaeplastida
Mp6g05400.1 No alias component VPS51/UNH of GARP/EARP... 0.03 Archaeplastida
Smo178902 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.06 Archaeplastida
Smo440937 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.03 Archaeplastida
Solyc01g079490.2.1 No alias component VPS51/UNH of GARP/EARP... 0.02 Archaeplastida
Solyc06g009650.3.1 No alias component VPS51/UNH of GARP/EARP... 0.08 Archaeplastida
Zm00001e012075_P003 No alias component VPS51/UNH of GARP/EARP... 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!