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  5. Pp3c12_7550V3.1

Pp3c12_7550V3.1


Description : TCP-1/cpn60 chaperonin family protein


Gene families : OG0003845 (Archaeplastida) Phylogenetic Tree(s): OG0003845_tree ,
OG_05_0004402 (LandPlants) Phylogenetic Tree(s): OG_05_0004402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_7550V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00176500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 Archaeplastida
AT5G26360 No alias TCP-1/cpn60 chaperonin family protein 0.06 Archaeplastida
Cpa|evm.model.tig00000615.79 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
Cre10.g443250 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 Archaeplastida
GSVIVT01000266001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
GSVIVT01007770001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
LOC_Os02g14929.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.02 Archaeplastida
LOC_Os06g34690.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.09 Archaeplastida
MA_37504g0010 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.04 Archaeplastida
Mp7g14360.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.06 Archaeplastida
Solyc05g056310.3.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.07 Archaeplastida
Zm00001e000822_P001 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.03 Archaeplastida
Zm00001e024916_P001 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 31 524
No external refs found!