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  5. AT4G16860

AT4G16860 (RPP4)


Aliases : RPP4

Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000769 (LandPlants) Phylogenetic Tree(s): OG_05_0000769_tree ,
OG_06_0000349 (SeedPlants) Phylogenetic Tree(s): OG_06_0000349_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G16860
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250450 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
AMTR_s00052p00159030 evm_27.TU.AmTr_v1... Probable disease resistance protein RPP1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00056p00089620 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.04 Archaeplastida
AMTR_s00056p00215980 evm_27.TU.AmTr_v1... Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1... 0.05 Archaeplastida
AMTR_s00056p00218850 No alias External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
AMTR_s00060p00214220 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
AMTR_s00109p00126980 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G27180 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.14 Archaeplastida
AT1G52900 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.05 Archaeplastida
AT1G57630 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.06 Archaeplastida
AT1G57650 No alias ATP binding 0.05 Archaeplastida
AT1G64070 RLM1 Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 Archaeplastida
AT1G66090 No alias Disease resistance protein (TIR-NBS class) 0.05 Archaeplastida
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.03 Archaeplastida
AT3G04220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT3G25505 No alias No description available 0.13 Archaeplastida
AT3G25510 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.1 Archaeplastida
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.16 Archaeplastida
AT4G11170 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.11 Archaeplastida
AT4G14370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT4G16857 No alias No description available 0.08 Archaeplastida
AT4G16900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT4G16920 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.11 Archaeplastida
AT5G17680 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
AT5G17970 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G18350 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.09 Archaeplastida
AT5G18370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 Archaeplastida
AT5G22690 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G38340 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 Archaeplastida
AT5G38344 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.15 Archaeplastida
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.16 Archaeplastida
AT5G44510 TAO1 target of AVRB operation1 0.04 Archaeplastida
AT5G49140 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.08 Archaeplastida
AT5G51630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
GSVIVT01012796001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01019193001 No alias External stimuli response.biotic stress.pathogen... 0.05 Archaeplastida
GSVIVT01020123001 No alias External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
GSVIVT01020983001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01022982001 No alias No description available 0.04 Archaeplastida
GSVIVT01022984001 No alias External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
GSVIVT01025907001 No alias External stimuli response.biotic stress.pathogen... 0.09 Archaeplastida
GSVIVT01038755001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.04 Archaeplastida
Gb_00097 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 Archaeplastida
Gb_00098 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 Archaeplastida
Gb_02566 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_02871 No alias Disease resistance-like protein DSC1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_04201 No alias effector receptor (NLR) 0.04 Archaeplastida
Gb_04748 No alias effector receptor (NLR) 0.06 Archaeplastida
Gb_04749 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.05 Archaeplastida
Gb_05909 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.05 Archaeplastida
Gb_09783 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 Archaeplastida
Gb_11158 No alias effector receptor (NLR) 0.06 Archaeplastida
Gb_11355 No alias Probable disease resistance protein RPP1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_11356 No alias effector receptor (NLR) 0.04 Archaeplastida
Gb_11526 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 Archaeplastida
Gb_12318 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_16251 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 Archaeplastida
Gb_16268 No alias Probable disease resistance protein RPP1 OS=Arabidopsis... 0.02 Archaeplastida
Gb_17461 No alias effector receptor (NLR) 0.05 Archaeplastida
Gb_18066 No alias effector receptor (NLR) 0.03 Archaeplastida
Gb_21496 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_23307 No alias effector receptor (NLR) 0.03 Archaeplastida
Gb_25097 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 Archaeplastida
Gb_26215 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 Archaeplastida
Gb_26523 No alias effector receptor (NLR) 0.04 Archaeplastida
Gb_29339 No alias effector receptor (NLR) 0.07 Archaeplastida
Gb_33283 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_33284 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_36252 No alias effector receptor (NLR) 0.04 Archaeplastida
Gb_38841 No alias effector receptor (NLR) 0.04 Archaeplastida
Gb_40939 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g014840.3.1 No alias effector receptor (NLR) 0.04 Archaeplastida
Solyc01g102840.3.1 No alias effector receptor (NLR) 0.03 Archaeplastida
Solyc01g102880.3.1 No alias effector receptor (NLR) 0.07 Archaeplastida
Solyc01g113620.3.1 No alias effector receptor (NLR) 0.03 Archaeplastida
Solyc02g032650.3.1 No alias effector receptor (NLR) 0.07 Archaeplastida
Solyc04g007320.3.1 No alias effector receptor (NLR) 0.06 Archaeplastida
Solyc05g007850.2.1 No alias effector receptor (NLR) 0.07 Archaeplastida
Solyc07g052780.3.1 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc07g055380.1.1 No alias effector receptor (NLR) 0.09 Archaeplastida
Solyc07g055610.3.1 No alias effector receptor (NLR) 0.03 Archaeplastida
Solyc09g092410.4.1 No alias effector receptor (NLR) 0.05 Archaeplastida
Solyc11g011080.3.1 No alias effector receptor (NLR) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006952 defense response ISS Interproscan
BP GO:0006952 defense response TAS Interproscan
BP GO:0009817 defense response to fungus, incompatible interaction ISS Interproscan
MF GO:0030275 LRR domain binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP Neighborhood
CC GO:0000139 Golgi membrane IEP Neighborhood
BP GO:0000165 MAPK cascade IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
BP GO:0002239 response to oomycetes IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
BP GO:0002764 immune response-regulating signaling pathway IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
BP GO:0009595 detection of biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009626 plant-type hypersensitive response IEP Neighborhood
BP GO:0009627 systemic acquired resistance IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016045 detection of bacterium IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016556 mRNA modification IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
MF GO:0019199 transmembrane receptor protein kinase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023014 signal transduction by protein phosphorylation IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0031348 negative regulation of defense response IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034050 host programmed cell death induced by symbiont IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0046713 borate transport IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0098543 detection of other organism IEP Neighborhood
BP GO:0098581 detection of external biotic stimulus IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 654 675
IPR000157 TIR_dom 13 175
IPR011713 Leu-rich_rpt_3 745 764
IPR011713 Leu-rich_rpt_3 608 626
IPR002182 NB-ARC 189 418
No external refs found!