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  5. AT4G16900

AT4G16900


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000769 (LandPlants) Phylogenetic Tree(s): OG_05_0000769_tree ,
OG_06_0000349 (SeedPlants) Phylogenetic Tree(s): OG_06_0000349_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G16900
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00126980 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G27180 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Archaeplastida
AT1G31540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT1G56510 WRR4, ADR2 Disease resistance protein (TIR-NBS-LRR class) 0.05 Archaeplastida
AT1G56520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT1G63740 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT1G63860 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT1G69550 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 Archaeplastida
AT2G16870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.05 Archaeplastida
AT3G25505 No alias No description available 0.04 Archaeplastida
AT3G25510 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
AT3G44400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT3G44480 cog1, RPP1 Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT3G44630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 Archaeplastida
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT4G16857 No alias No description available 0.04 Archaeplastida
AT4G16860 RPP4 Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT4G16890 SNC1, BAL disease resistance protein (TIR-NBS-LRR class), putative 0.04 Archaeplastida
AT4G16920 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G18350 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G18370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G22690 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G38344 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.05 Archaeplastida
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.03 Archaeplastida
AT5G40060 No alias Disease resistance protein (NBS-LRR class) family 0.05 Archaeplastida
AT5G41750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G44510 TAO1 target of AVRB operation1 0.03 Archaeplastida
AT5G46260 No alias disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT5G46270 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G46450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G46470 RPS6 disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.04 Archaeplastida
AT5G46510 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT5G46520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
GSVIVT01012762001 No alias External stimuli response.biotic stress.pathogen... 0.04 Archaeplastida
Gb_04201 No alias effector receptor (NLR) 0.04 Archaeplastida
Gb_12318 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_21496 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_33283 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_33284 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_36252 No alias effector receptor (NLR) 0.04 Archaeplastida
MA_10433003g0040 No alias effector receptor (NLR) 0.04 Archaeplastida
Solyc01g113620.3.1 No alias effector receptor (NLR) 0.04 Archaeplastida
Solyc04g007320.3.1 No alias effector receptor (NLR) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005217 intracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005221 intracellular cyclic nucleotide activated cation channel activity IEP Neighborhood
MF GO:0005223 intracellular cGMP-activated cation channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005262 calcium channel activity IEP Neighborhood
MF GO:0005267 potassium channel activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005884 actin filament IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009816 defense response to bacterium, incompatible interaction IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015085 calcium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016444 somatic cell DNA recombination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030551 cyclic nucleotide binding IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043855 cyclic nucleotide-gated ion channel activity IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0045739 positive regulation of DNA repair IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0051014 actin filament severing IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
BP GO:0051017 actin filament bundle assembly IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0061572 actin filament bundle organization IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
MF GO:0099094 ligand-gated cation channel activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
BP GO:2001022 positive regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR011713 Leu-rich_rpt_3 559 577
IPR011713 Leu-rich_rpt_3 686 706
IPR000157 TIR_dom 12 177
IPR002182 NB-ARC 188 414
No external refs found!