1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c13_11410V3.1

Pp3c13_11410V3.1


Description : ubiquitin activating enzyme 2


Gene families : OG0001185 (Archaeplastida) Phylogenetic Tree(s): OG0001185_tree ,
OG_05_0002102 (LandPlants) Phylogenetic Tree(s): OG_05_0002102_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_11410V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00065050 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AT2G30110 UBA1, MOS5, ATUBA1 ubiquitin-activating enzyme 1 0.03 Archaeplastida
AT5G06460 ATUBA2, UBA 2 ubiquitin activating enzyme 2 0.04 Archaeplastida
Cpa|evm.model.tig00000057.43 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Cre09.g386400 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01024680001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_00042 No alias ubiquitin-activating E1 protein 0.04 Archaeplastida
LOC_Os03g18380.3 No alias ubiquitin-activating E1 protein 0.04 Archaeplastida
LOC_Os11g01510.2 No alias ubiquitin-activating E1 protein 0.05 Archaeplastida
Mp4g15300.1 No alias ubiquitin-activating E1 protein 0.04 Archaeplastida
Mp7g08080.1 No alias ubiquitin-activating E1 protein 0.03 Archaeplastida
Solyc06g007320.3.1 No alias ubiquitin-activating E1 protein 0.02 Archaeplastida
Solyc09g018450.3.1 No alias ubiquitin-activating E1 protein 0.04 Archaeplastida
Zm00001e009293_P001 No alias ubiquitin-activating E1 protein 0.08 Archaeplastida
Zm00001e023945_P001 No alias ubiquitin-activating E1 protein 0.08 Archaeplastida
Zm00001e035939_P002 No alias ubiquitin-activating E1 protein 0.02 Archaeplastida
Zm00001e039170_P001 No alias ubiquitin-activating E1 protein 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!