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  5. Pp3c13_21190V3.1

Pp3c13_21190V3.1


Description : cycling DOF factor 3


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_21190V3.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00119p00099150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
AT1G26790 No alias Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT3G47500 CDF3 cycling DOF factor 3 0.03 Archaeplastida
AT3G52440 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT5G60850 OBP4 OBF binding protein 4 0.02 Archaeplastida
AT5G62430 CDF1 cycling DOF factor 1 0.03 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01007992001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
LOC_Os03g38870.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g48570.1 No alias transcription factor (DOF) 0.08 Archaeplastida
Smo89924 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc02g067230.3.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc02g077960.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc05g007880.4.1 No alias Cyclic dof factor 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc06g069760.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e000526_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e017319_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e027634_P002 No alias transcription factor (DOF) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!