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  5. Pp3c13_2440V3.1

Pp3c13_2440V3.1


Description : EF hand calcium-binding protein family


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_2440V3.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00127800 evm_27.TU.AmTr_v1... Calmodulin OS=Solanum lycopersicum 0.02 Archaeplastida
AMTR_s00095p00113890 evm_27.TU.AmTr_v1... Calmodulin OS=Medicago sativa 0.02 Archaeplastida
AT4G12860 UNE14 EF hand calcium-binding protein family 0.02 Archaeplastida
AT4G14640 AtCML8, CAM8 calmodulin 8 0.02 Archaeplastida
Cre11.g468450 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
GSVIVT01003796001 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g39380.1 No alias Probable calcium-binding protein CML17 OS=Oryza sativa... 0.05 Archaeplastida
LOC_Os05g41210.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
LOC_Os08g04890.1 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.04 Archaeplastida
MA_15211g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
MA_194997g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 130.0) 0.02 Archaeplastida
MA_52212g0010 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
MA_66990g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9257733g0010 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.02 Archaeplastida
Mp1g22210.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c6_1770V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Solyc04g008000.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
Solyc09g055880.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 35 94
IPR002048 EF_hand_dom 118 180
No external refs found!