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  5. Pp3c13_4370V3.1

Pp3c13_4370V3.1


Description : XB3 ortholog 5 in Arabidopsis thaliana


Gene families : OG0003141 (Archaeplastida) Phylogenetic Tree(s): OG0003141_tree ,
OG_05_0003032 (LandPlants) Phylogenetic Tree(s): OG_05_0003032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_4370V3.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT4G14365 XBAT34 XB3 ortholog 4 in Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os07g26490.1 No alias RING-HC-class E3 ligase 0.05 Archaeplastida
MA_105066g0010 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!