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  5. Pp3c13_7380V3.1

Pp3c13_7380V3.1


Description : DEA(D/H)-box RNA helicase family protein


Gene families : OG0006538 (Archaeplastida) Phylogenetic Tree(s): OG0006538_tree ,
OG_05_0008733 (LandPlants) Phylogenetic Tree(s): OG_05_0008733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_7380V3.1
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AT1G59990 No alias DEA(D/H)-box RNA helicase family protein 0.06 Archaeplastida
GSVIVT01020175001 No alias DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa... 0.08 Archaeplastida
Gb_16357 No alias DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os09g21520.2 No alias DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa... 0.02 Archaeplastida
Mp7g00430.1 No alias DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa... 0.01 Archaeplastida
Solyc05g006130.4.1 No alias DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa... 0.11 Archaeplastida
Zm00001e034031_P002 No alias DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 110 276
IPR001650 Helicase_C 433 539
No external refs found!