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  5. Pp3c13_8880V3.1

Pp3c13_8880V3.1


Description : myb domain protein 4r1


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0006168 (LandPlants) Phylogenetic Tree(s): OG_05_0006168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_8880V3.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT3G55730 AtMYB109, MYB109 myb domain protein 109 0.02 Archaeplastida
AT3G62610 ATMYB11, PFG2, MYB11 myb domain protein 11 0.02 Archaeplastida
Cpa|evm.model.tig00021038.78 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre17.g714229 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011436001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01034171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
LOC_Os01g12860.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g49160.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g62410.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g17190.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g46384.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g43420.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_114955g0020 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.02 Archaeplastida
MA_158099g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_51173g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g119050.4.1 No alias component SNAPC4 of SNAP snRNA transcription factor complex 0.02 Archaeplastida
Solyc08g080580.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g010820.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc09g055650.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e010822_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e011862_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016403_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019321_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e026250_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028763_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!