AT4G17940

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG0005386 (Archaeplastida) Phylogenetic Tree(s): OG0005386_tree ,
OG_05_0003471 (LandPlants) Phylogenetic Tree(s): OG_05_0003471_tree ,
OG_06_0001326 (SeedPlants) Phylogenetic Tree(s): OG_06_0001326_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G17940
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc06g068130.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc07g008210.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000315	organellar large ribosomal subunit	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
MF	GO:0005199	structural constituent of cell wall	IEP	Neighborhood
CC	GO:0005762	mitochondrial large ribosomal subunit	IEP	Neighborhood
CC	GO:0005768	endosome	IEP	Neighborhood
CC	GO:0005802	trans-Golgi network	IEP	Neighborhood
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	Neighborhood
CC	GO:0031410	cytoplasmic vesicle	IEP	Neighborhood
CC	GO:0031982	vesicle	IEP	Neighborhood
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
BP	GO:0055081	anion homeostasis	IEP	Neighborhood
MF	GO:0080072	spermidine:sinapoyl CoA N-acyltransferase activity	IEP	Neighborhood
MF	GO:0080089	sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity	IEP	Neighborhood
BP	GO:0080144	amino acid homeostasis	IEP	Neighborhood
CC	GO:0097708	intracellular vesicle	IEP	Neighborhood
CC	GO:0098791	Golgi subcompartment	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!