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  5. Pp3c14_19320V3.1

Pp3c14_19320V3.1


Description : double-stranded DNA-binding family protein


Gene families : OG0006596 (Archaeplastida) Phylogenetic Tree(s): OG0006596_tree ,
OG_05_0006957 (LandPlants) Phylogenetic Tree(s): OG_05_0006957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_19320V3.1
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00136130 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G29850 No alias double-stranded DNA-binding family protein 0.03 Archaeplastida
Cre12.g557800 No alias No description available 0.04 Archaeplastida
Zm00001e032307_P001 No alias Prgrammed Cell Death regulatory factor (PDCD5) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002836 PDCD5-like 9 125
No external refs found!