1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c14_1940V3.1

Pp3c14_1940V3.1


Description : phragmoplastin interacting protein 1


Gene families : OG0004733 (Archaeplastida) Phylogenetic Tree(s): OG0004733_tree ,
OG_05_0005065 (LandPlants) Phylogenetic Tree(s): OG_05_0005065_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_1940V3.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AT3G55340 PHIP1 phragmoplastin interacting protein 1 0.05 Archaeplastida
Cpa|evm.model.tig00000441.24 No alias Nucleolin 1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cre10.g466450 No alias No description available 0.12 Archaeplastida
GSVIVT01016604001 No alias No description available 0.04 Archaeplastida
LOC_Os03g03140.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g02400.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g24090.1 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.07 Archaeplastida
Solyc06g018110.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029603_P002 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!