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  5. Pp3c14_22340V3.1

Pp3c14_22340V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0003862 (Archaeplastida) Phylogenetic Tree(s): OG0003862_tree ,
OG_05_0004743 (LandPlants) Phylogenetic Tree(s): OG_05_0004743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_22340V3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00052p00194740 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.04 Archaeplastida
AT2G46280 TRIP-1, TIF3I1 TGF-beta receptor interacting protein 1 0.05 Archaeplastida
AT2G46290 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Cre03.g194400 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
GSVIVT01011562001 No alias Protein biosynthesis.translation... 0.07 Archaeplastida
Gb_07392 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
LOC_Os05g16660.2 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.11 Archaeplastida
LOC_Os08g21660.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.07 Archaeplastida
Mp2g16930.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.1 Archaeplastida
Smo269383 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
Solyc11g017070.2.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.06 Archaeplastida
Zm00001e011477_P001 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.02 Archaeplastida
Zm00001e032881_P001 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!