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  5. Pp3c14_3960V3.1

Pp3c14_3960V3.1


Description : 5\-3\ exonuclease family protein


Gene families : OG0009908 (Archaeplastida) Phylogenetic Tree(s): OG0009908_tree ,
OG_05_0009929 (LandPlants) Phylogenetic Tree(s): OG_05_0009929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_3960V3.1
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Pp3c13_14640V3.1 No alias 5\-3\ exonuclease family protein 0.03 Archaeplastida
Pp3c13_14688V3.1 No alias 5\-3\ exonuclease family protein 0.03 Archaeplastida
Pp3c13_19021V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c15_13740V3.1 No alias No annotation 0.07 Archaeplastida
Pp3c16_2390V3.1 No alias 5\-3\ exonuclease family protein 0.04 Archaeplastida
Pp3c16_6040V3.1 No alias 5\-3\ exonuclease family protein 0.03 Archaeplastida
Pp3c1_10611V3.1 No alias 5\-3\ exonuclease family protein 0.02 Archaeplastida
Pp3c1_300V3.1 No alias 5\-3\ exonuclease family protein 0.04 Archaeplastida
Pp3c25_2980V3.1 No alias 5\-3\ exonuclease family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 99 175
No external refs found!