Pp3c14_4010V3.1


Description : RNA polymerase II large subunit


Gene families : OG0006451 (Archaeplastida) Phylogenetic Tree(s): OG0006451_tree ,
OG_05_0004749 (LandPlants) Phylogenetic Tree(s): OG_05_0004749_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_4010V3.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Pp3c14_231V3.1 No alias nuclear RNA polymerase D1A 0.04 Archaeplastida
Pp3c15_19420V3.1 No alias nuclear RNA polymerase A1 0.02 Archaeplastida
Pp3c19_15140V3.1 No alias RNA polymerase II large subunit 0.03 Archaeplastida
Pp3c1_270V3.1 No alias RNA polymerase II large subunit 0.06 Archaeplastida
Pp3c1_30040V3.1 No alias RNA polymerase II large subunit 0.03 Archaeplastida
Pp3c24_10300V3.1 No alias RNA polymerase II large subunit 0.04 Archaeplastida
Pp3c4_24940V3.1 No alias RNA polymerase II large subunit 0.03 Archaeplastida
Pp3c8_4620V3.1 No alias RNA polymerase II large subunit 0.03 Archaeplastida
Pp3s67_110V3.1 No alias RNA polymerase II large subunit 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000722 RNA_pol_asu 1 54
No external refs found!