Description : RNA polymerase II large subunit
Gene families : OG0006451 (Archaeplastida) Phylogenetic Tree(s): OG0006451_tree ,
OG_05_0004749 (LandPlants) Phylogenetic Tree(s): OG_05_0004749_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c14_4010V3.1 | |
Cluster | HCCA: Cluster_164 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Pp3c14_231V3.1 | No alias | nuclear RNA polymerase D1A | 0.04 | Archaeplastida | |
Pp3c15_19420V3.1 | No alias | nuclear RNA polymerase A1 | 0.02 | Archaeplastida | |
Pp3c19_15140V3.1 | No alias | RNA polymerase II large subunit | 0.03 | Archaeplastida | |
Pp3c1_270V3.1 | No alias | RNA polymerase II large subunit | 0.06 | Archaeplastida | |
Pp3c1_30040V3.1 | No alias | RNA polymerase II large subunit | 0.03 | Archaeplastida | |
Pp3c24_10300V3.1 | No alias | RNA polymerase II large subunit | 0.04 | Archaeplastida | |
Pp3c4_24940V3.1 | No alias | RNA polymerase II large subunit | 0.03 | Archaeplastida | |
Pp3c8_4620V3.1 | No alias | RNA polymerase II large subunit | 0.03 | Archaeplastida | |
Pp3s67_110V3.1 | No alias | RNA polymerase II large subunit | 0.09 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005507 | copper ion binding | IEP | Neighborhood |
BP | GO:0006631 | fatty acid metabolic process | IEP | Neighborhood |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | Neighborhood |
BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
MF | GO:0016790 | thiolester hydrolase activity | IEP | Neighborhood |
MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Neighborhood |
BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000722 | RNA_pol_asu | 1 | 54 |
No external refs found! |