AT4G18870

Description : E2F/DP family winged-helix DNA-binding domain

Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0046584 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0041241 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18870
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
Gb_15358	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.03	Archaeplastida
LOC_Os03g06630.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os04g48030.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
MA_10432269g0010	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.01	Archaeplastida
Pp3c18_9360V3.1	No alias	heat shock transcription factor B4	0.03	Archaeplastida
Smo37324	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
Smo93081	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
Zm00001e037244_P001	No alias	transcription factor (HSF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005200	structural constituent of cytoskeleton	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Neighborhood
MF	GO:0009824	AMP dimethylallyltransferase activity	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Neighborhood
MF	GO:0052622	ATP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0052623	ADP dimethylallyltransferase activity	IEP	Neighborhood
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	Neighborhood
BP	GO:1900618	regulation of shoot system morphogenesis	IEP	Neighborhood
BP	GO:1905428	regulation of plant organ formation	IEP	Neighborhood
MF	GO:1990135	flavonoid sulfotransferase activity	IEP	Neighborhood
BP	GO:2000032	regulation of secondary shoot formation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	14	99
IPR000232	HSF_DNA-bd	147	233

External Links

No external refs found!

AT4G18870

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation