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  5. AT1G18620

AT1G18620


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits to 1263 proteins in 207 species: Archae - 0; Bacteria - 172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6; Other Eukaryotes - 724 (source: NCBI BLink).


Gene families : OG0002228 (Archaeplastida) Phylogenetic Tree(s): OG0002228_tree ,
OG_05_0001465 (LandPlants) Phylogenetic Tree(s): OG_05_0001465_tree ,
OG_06_0001921 (SeedPlants) Phylogenetic Tree(s): OG_06_0001921_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G18620
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003137001 No alias No description available 0.04 Archaeplastida
Gb_12665 No alias component TRM of TON1-TRM-PP2A (TTP) preprophase band... 0.05 Archaeplastida
LOC_Os07g01860.1 No alias component TRM of TON1-TRM-PP2A (TTP) preprophase band... 0.05 Archaeplastida
LOC_Os07g41200.1 No alias component TRM of TON1-TRM-PP2A (TTP) preprophase band... 0.03 Archaeplastida
LOC_Os11g37670.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_136139g0010 No alias component TRM of TON1-TRM-PP2A (TTP) preprophase band... 0.02 Archaeplastida
Solyc02g089030.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc02g089050.4.1 No alias component TRM of TON1-TRM-PP2A (TTP) preprophase band... 0.03 Archaeplastida
Solyc03g115000.3.1 No alias component TRM of TON1-TRM-PP2A (TTP) preprophase band... 0.05 Archaeplastida
Solyc07g008670.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e010738_P001 No alias component TRM of TON1-TRM-PP2A (TTP) preprophase band... 0.04 Archaeplastida
Zm00001e033505_P003 No alias component TRM of TON1-TRM-PP2A (TTP) preprophase band... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009740 gibberellic acid mediated signaling pathway RCA Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP Neighborhood
BP GO:0001558 regulation of cell growth IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0007602 phototransduction IEP Neighborhood
BP GO:0007623 circadian rhythm IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008156 negative regulation of DNA replication IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009299 mRNA transcription IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
CC GO:0009531 secondary cell wall IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009585 red, far-red light phototransduction IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009637 response to blue light IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009739 response to gibberellin IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
MF GO:0009882 blue light photoreceptor activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
CC GO:0009898 cytoplasmic side of plasma membrane IEP Neighborhood
BP GO:0009903 chloroplast avoidance movement IEP Neighborhood
BP GO:0009904 chloroplast accumulation movement IEP Neighborhood
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010187 negative regulation of seed germination IEP Neighborhood
BP GO:0010218 response to far red light IEP Neighborhood
BP GO:0010232 vascular transport IEP Neighborhood
BP GO:0010233 phloem transport IEP Neighborhood
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP Neighborhood
BP GO:0010360 negative regulation of anion channel activity IEP Neighborhood
BP GO:0010361 regulation of anion channel activity by blue light IEP Neighborhood
BP GO:0010362 negative regulation of anion channel activity by blue light IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010600 regulation of auxin biosynthetic process IEP Neighborhood
BP GO:0010617 circadian regulation of calcium ion oscillation IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
BP GO:0010948 negative regulation of cell cycle process IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016556 mRNA modification IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019199 transmembrane receptor protein kinase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0022604 regulation of cell morphogenesis IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030308 negative regulation of cell growth IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032410 negative regulation of transporter activity IEP Neighborhood
BP GO:0032413 negative regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0032875 regulation of DNA endoreduplication IEP Neighborhood
BP GO:0032876 negative regulation of DNA endoreduplication IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034763 negative regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
BP GO:0034766 negative regulation of ion transmembrane transport IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0036473 cell death in response to oxidative stress IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0043271 negative regulation of ion transport IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043425 bHLH transcription factor binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0048511 rhythmic process IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051051 negative regulation of transport IEP Neighborhood
BP GO:0051053 negative regulation of DNA metabolic process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP Neighborhood
BP GO:0051510 regulation of unidimensional cell growth IEP Neighborhood
BP GO:0051513 regulation of monopolar cell growth IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071483 cellular response to blue light IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090354 regulation of auxin metabolic process IEP Neighborhood
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098562 cytoplasmic side of membrane IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903792 negative regulation of anion transport IEP Neighborhood
BP GO:1903960 negative regulation of anion transmembrane transport IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:2000033 regulation of seed dormancy process IEP Neighborhood
BP GO:2000034 regulation of seed maturation IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR032795 DUF3741-assoc 270 293
IPR025486 DUF4378 780 955
No external refs found!