1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c15_8230V3.1

Pp3c15_8230V3.1


Description : TCP-1/cpn60 chaperonin family protein


Gene families : OG0005559 (Archaeplastida) Phylogenetic Tree(s): OG0005559_tree ,
OG_05_0006355 (LandPlants) Phylogenetic Tree(s): OG_05_0006355_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_8230V3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00107630 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
AT3G11830 No alias TCP-1/cpn60 chaperonin family protein 0.05 Archaeplastida
Cpa|evm.model.tig00001371.8 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
Cre01.g026550 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 Archaeplastida
GSVIVT01002278001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
MA_20110g0010 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.05 Archaeplastida
Mp7g09680.1 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.05 Archaeplastida
Smo168086 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
Solyc06g065520.3.1 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.08 Archaeplastida
Zm00001e025196_P001 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 33 523
No external refs found!