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  5. Pp3c16_11960V3.1

Pp3c16_11960V3.1


Description : No annotation


Gene families : OG0000711 (Archaeplastida) Phylogenetic Tree(s): OG0000711_tree ,
OG_05_0002739 (LandPlants) Phylogenetic Tree(s): OG_05_0002739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_11960V3.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272260 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.04 Archaeplastida
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 Archaeplastida
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.04 Archaeplastida
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 Archaeplastida
GSVIVT01027036001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.07 Archaeplastida
GSVIVT01027447001 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.03 Archaeplastida
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 Archaeplastida
Gb_09245 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 Archaeplastida
LOC_Os01g55570.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g49870.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.07 Archaeplastida
LOC_Os02g52260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g15400.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
LOC_Os07g28610.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.06 Archaeplastida
LOC_Os10g39150.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 Archaeplastida
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 Archaeplastida
MA_734271g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_904218g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Mp6g20800.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.08 Archaeplastida
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.07 Archaeplastida
Pp3c17_14680V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c8_17810V3.1 No alias No annotation 0.05 Archaeplastida
Smo49217 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 Archaeplastida
Solyc01g095430.3.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.07 Archaeplastida
Solyc06g066620.4.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.03 Archaeplastida
Solyc10g005050.3.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.04 Archaeplastida
Solyc10g011770.4.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 Archaeplastida
Zm00001e000193_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Zm00001e002212_P002 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 Archaeplastida
Zm00001e015912_P002 No alias Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.02 Archaeplastida
Zm00001e023473_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
Zm00001e023828_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029009_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e030948_P002 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Zm00001e034870_P002 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
InterPro domains Description Start Stop
IPR025564 CAAD_dom 98 181
No external refs found!