Coexpression cluster: Cluster_88 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 13.16% (20/152) 6.93 0.0 0.0
GO:0009521 photosystem 12.5% (19/152) 6.94 0.0 0.0
GO:0015979 photosynthesis 12.5% (19/152) 6.74 0.0 0.0
GO:0098796 membrane protein complex 13.16% (20/152) 5.57 0.0 0.0
GO:0009522 photosystem I 6.58% (10/152) 7.36 0.0 0.0
GO:0044425 membrane part 13.16% (20/152) 4.54 0.0 0.0
GO:0009523 photosystem II 5.92% (9/152) 6.66 0.0 0.0
GO:0009538 photosystem I reaction center 4.61% (7/152) 7.38 0.0 0.0
GO:0032991 protein-containing complex 13.16% (20/152) 3.23 0.0 0.0
GO:0044424 intracellular part 13.16% (20/152) 3.0 0.0 0.0
GO:0044464 cell part 13.16% (20/152) 2.98 0.0 0.0
GO:0005575 cellular_component 13.16% (20/152) 2.53 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 3.29% (5/152) 6.48 0.0 0.0
GO:1990204 oxidoreductase complex 3.29% (5/152) 5.97 0.0 0.0
GO:0044237 cellular metabolic process 13.16% (20/152) 2.22 0.0 0.0
GO:0009987 cellular process 13.82% (21/152) 2.09 0.0 0.0
GO:0008152 metabolic process 14.47% (22/152) 1.92 0.0 1e-06
GO:0008150 biological_process 15.13% (23/152) 1.6 2e-06 1.7e-05
GO:0016020 membrane 4.61% (7/152) 3.59 2e-06 1.8e-05
GO:1902494 catalytic complex 3.29% (5/152) 4.33 5e-06 4.1e-05
GO:0042651 thylakoid membrane 1.32% (2/152) 7.15 6.5e-05 0.00044
GO:0009507 chloroplast 1.32% (2/152) 7.15 6.5e-05 0.00044
GO:0034357 photosynthetic membrane 1.32% (2/152) 7.15 6.5e-05 0.00044
GO:0009536 plastid 1.32% (2/152) 7.15 6.5e-05 0.00044
GO:0019898 extrinsic component of membrane 1.32% (2/152) 5.93 0.000451 0.002919
GO:0043169 cation binding 3.29% (5/152) 2.46 0.002256 0.013535
GO:0046872 metal ion binding 3.29% (5/152) 2.47 0.002206 0.013744
GO:0010109 regulation of photosynthesis 0.66% (1/152) 7.74 0.004683 0.022989
GO:0010207 photosystem II assembly 0.66% (1/152) 7.74 0.004683 0.022989
GO:0010242 oxygen evolving activity 0.66% (1/152) 7.74 0.004683 0.022989
GO:0042548 regulation of photosynthesis, light reaction 0.66% (1/152) 7.74 0.004683 0.022989
GO:0042549 photosystem II stabilization 0.66% (1/152) 7.74 0.004683 0.022989
GO:0043467 regulation of generation of precursor metabolites and energy 0.66% (1/152) 7.74 0.004683 0.022989
GO:0005509 calcium ion binding 1.32% (2/152) 4.21 0.005167 0.024621
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_98 0.092 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_106 0.211 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_151 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_23 0.065 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_124 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.065 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.109 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_12 0.036 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.049 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_133 0.094 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.041 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_107 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_114 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_146 0.176 Archaeplastida Compare
Zea mays HCCA Cluster_148 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_187 0.047 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_319 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.057 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.062 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.255 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_93 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_144 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_205 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.05 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_240 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_282 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.05 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.08 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.056 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_324 0.06 Archaeplastida Compare
Picea abies HCCA Cluster_343 0.05 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.089 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_148 0.165 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.058 Archaeplastida Compare
Oryza sativa HCCA Cluster_243 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_248 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.062 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.045 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.032 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.082 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.042 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_150 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_196 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.106 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_110 0.09 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.047 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.06 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.053 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.074 Archaeplastida Compare
Vitis vinifera HCCA Cluster_137 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_176 0.127 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.056 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.178 Archaeplastida Compare
Sequences (152) (download table)

InterPro Domains

GO Terms

Family Terms