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  5. Pp3c16_16110V3.1

Pp3c16_16110V3.1


Description : RP non-ATPase subunit 8A


Gene families : OG0005523 (Archaeplastida) Phylogenetic Tree(s): OG0005523_tree ,
OG_05_0006290 (LandPlants) Phylogenetic Tree(s): OG_05_0006290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_16110V3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.78 No alias Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
Cre06.g278256 No alias Protein degradation.26S proteasome.regulatory... 0.09 Archaeplastida
GSVIVT01033994001 No alias Protein degradation.26S proteasome.regulatory... 0.03 Archaeplastida
Gb_05727 No alias regulatory component RPN8 of 26S proteasome 0.03 Archaeplastida
Smo174670 No alias Protein degradation.26S proteasome.regulatory... 0.03 Archaeplastida
Zm00001e041848_P003 No alias regulatory component RPN8 of 26S proteasome 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!