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  5. Pp3c16_1979V3.1

Pp3c16_1979V3.1


Description : No annotation


Gene families : OG0001132 (Archaeplastida) Phylogenetic Tree(s): OG0001132_tree ,
OG_05_0018978 (LandPlants) Phylogenetic Tree(s): OG_05_0018978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_1979V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT5G62090 SLK2 SEUSS-like 2 0.03 Archaeplastida
GSVIVT01010013001 No alias Transcriptional corepressor SEUSS OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01010616001 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_04695 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.02 Archaeplastida
Gb_27183 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g03600.1 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os11g10060.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os11g10070.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 Archaeplastida
MA_12796g0010 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 Archaeplastida
MA_13825g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_208023g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_28020g0010 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.02 Archaeplastida
MA_33392g0010 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c25_7810V3.1 No alias SEUSS transcriptional co-regulator 0.03 Archaeplastida
Solyc03g026190.3.1 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g059760.3.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e011073_P001 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e018384_P001 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e021381_P001 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e029868_P001 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e039584_P001 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!