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  5. Pp3c17_15750V3.1

Pp3c17_15750V3.1


Description : Histone superfamily protein


Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree ,
OG_05_0000249 (LandPlants) Phylogenetic Tree(s): OG_05_0000249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_15750V3.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00085300 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
AT1G07790 HTB1 Histone superfamily protein 0.03 Archaeplastida
AT3G45980 HTB9, H2B Histone superfamily protein 0.02 Archaeplastida
AT3G46030 HTB11 Histone superfamily protein 0.02 Archaeplastida
AT3G53650 No alias Histone superfamily protein 0.03 Archaeplastida
AT5G59910 HTB4 Histone superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00000944.18 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
LOC_Os05g49860.1 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os08g38300.1 No alias histone (H2B) 0.02 Archaeplastida
Mp6g04070.1 No alias histone (H2B) 0.02 Archaeplastida
Pp3c14_21050V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Smo73644 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Solyc02g038690.1.1 No alias histone (H2B) 0.02 Archaeplastida
Solyc12g011455.1.1 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e009857_P001 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e010906_P002 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e019346_P001 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e028779_P003 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e034226_P001 No alias histone (H2B) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 8 112
No external refs found!