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  5. Pp3c17_16150V3.1

Pp3c17_16150V3.1


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG0000741 (Archaeplastida) Phylogenetic Tree(s): OG0000741_tree ,
OG_05_0001199 (LandPlants) Phylogenetic Tree(s): OG_05_0001199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_16150V3.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00151100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
AT5G42700 No alias AP2/B3-like transcriptional factor family protein 0.11 Archaeplastida
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.11 Archaeplastida
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.1 Archaeplastida
Gb_07025 No alias transcription factor (REM) 0.02 Archaeplastida
Gb_35990 No alias transcription factor (REM) 0.09 Archaeplastida
LOC_Os03g08620.1 No alias transcription factor (REM) 0.04 Archaeplastida
MA_10430774g0010 No alias No annotation 0.03 Archaeplastida
MA_10433064g0010 No alias transcription factor (REM) 0.03 Archaeplastida
MA_430451g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_59943g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g08790.1 No alias transcription factor (REM) 0.08 Archaeplastida
Pp3c21_16260V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Pp3c2_5990V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Smo413242 No alias No description available 0.06 Archaeplastida
Smo424732 No alias RNA biosynthesis.transcriptional activation.B3... 0.06 Archaeplastida
Solyc04g079130.2.1 No alias transcription factor (REM) 0.02 Archaeplastida
Solyc06g007530.2.1 No alias transcription factor (REM) 0.03 Archaeplastida
Zm00001e000624_P003 No alias transcription factor (REM) 0.08 Archaeplastida
Zm00001e040028_P004 No alias transcription factor (REM) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!