Pp3c17_21330V3.1


Description : Proteasome component (PCI) domain protein


Gene families : OG0003910 (Archaeplastida) Phylogenetic Tree(s): OG0003910_tree ,
OG_05_0005226 (LandPlants) Phylogenetic Tree(s): OG_05_0005226_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_21330V3.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00229860 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 Archaeplastida
AT3G02200 No alias Proteasome component (PCI) domain protein 0.02 Archaeplastida
Cpa|evm.model.tig00020903.23 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
GSVIVT01032900001 No alias Protein biosynthesis.translation... 0.06 Archaeplastida
LOC_Os04g01290.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.06 Archaeplastida
MA_10427723g0010 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.06 Archaeplastida
MA_10436971g0010 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
Mp6g05770.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Smo416377 No alias Protein biosynthesis.translation... 0.05 Archaeplastida
Solyc02g089070.3.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida
Zm00001e025912_P001 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!