AT4G22010 (sks4)

Aliases : sks4

Description : SKU5 similar 4

Gene families : OG0000677 (Archaeplastida) Phylogenetic Tree(s): OG0000677_tree ,
OG_05_0000383 (LandPlants) Phylogenetic Tree(s): OG_05_0000383_tree ,
OG_06_0000772 (SeedPlants) Phylogenetic Tree(s): OG_06_0000772_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G22010
Cluster	HCCA: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00037p00216460	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.10...	0.03	Archaeplastida
AMTR_s00159p00040990	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.10...	0.03	Archaeplastida
AT1G55560	sks14	SKU5 similar 14	0.03	Archaeplastida
GSVIVT01012709001	No alias	L-ascorbate oxidase homolog OS=Brassica napus	0.03	Archaeplastida
GSVIVT01023902001	No alias	L-ascorbate oxidase homolog OS=Brassica napus	0.03	Archaeplastida
Gb_17061	No alias	L-ascorbate oxidase homolog OS=Brassica napus...	0.03	Archaeplastida
LOC_Os05g40740.3	No alias	L-ascorbate oxidase homolog OS=Brassica napus...	0.02	Archaeplastida
LOC_Os07g02810.1	No alias	L-ascorbate oxidase homolog OS=Nicotiana tabacum...	0.02	Archaeplastida
LOC_Os07g32660.1	No alias	L-ascorbate oxidase homolog OS=Brassica napus...	0.05	Archaeplastida
MA_10236360g0010	No alias	L-ascorbate oxidase homolog OS=Brassica napus...	0.03	Archaeplastida
MA_161013g0010	No alias	L-ascorbate oxidase homolog OS=Nicotiana tabacum...	0.03	Archaeplastida
Smo229918	No alias	L-ascorbate oxidase homolog OS=Brassica napus	0.05	Archaeplastida
Smo410532	No alias	Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana	0.02	Archaeplastida
Solyc02g065170.3.1	No alias	L-ascorbate oxidase homolog OS=Nicotiana tabacum...	0.05	Archaeplastida
Solyc02g090360.3.1	No alias	L-ascorbate oxidase homolog OS=Nicotiana tabacum...	0.04	Archaeplastida
Solyc04g082140.3.1	No alias	L-ascorbate oxidase homolog OS=Brassica napus...	0.03	Archaeplastida
Solyc07g052230.3.1	No alias	L-ascorbate oxidase homolog OS=Nicotiana tabacum...	0.06	Archaeplastida
Zm00001e012961_P001	No alias	L-ascorbate oxidase homolog OS=Nicotiana tabacum...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	RCA	Interproscan
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009505	plant-type cell wall	IDA	Interproscan
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009825	multidimensional cell growth	RCA	Interproscan
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009932	cell tip growth	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0010817	regulation of hormone levels	RCA	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043473	pigmentation	None	Extended
BP	GO:0043476	pigment accumulation	None	Extended
BP	GO:0043478	pigment accumulation in response to UV light	None	Extended
BP	GO:0043479	pigment accumulation in tissues in response to UV light	None	Extended
BP	GO:0043480	pigment accumulation in tissues	None	Extended
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	RCA	Interproscan
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048653	anther development	RCA	Interproscan
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0000234	phosphoethanolamine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0002237	response to molecule of bacterial origin	IEP	Neighborhood
BP	GO:0003002	regionalization	IEP	Neighborhood
MF	GO:0003674	molecular_function	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003878	ATP citrate synthase activity	IEP	Neighborhood
MF	GO:0004001	adenosine kinase activity	IEP	Neighborhood
MF	GO:0004013	adenosylhomocysteinase activity	IEP	Neighborhood
MF	GO:0004496	mevalonate kinase activity	IEP	Neighborhood
MF	GO:0004563	beta-N-acetylhexosaminidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
MF	GO:0005199	structural constituent of cell wall	IEP	Neighborhood
MF	GO:0005200	structural constituent of cytoskeleton	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005773	vacuole	IEP	Neighborhood
CC	GO:0005774	vacuolar membrane	IEP	Neighborhood
CC	GO:0005802	trans-Golgi network	IEP	Neighborhood
CC	GO:0005829	cytosol	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0006084	acetyl-CoA metabolic process	IEP	Neighborhood
BP	GO:0006085	acetyl-CoA biosynthetic process	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006163	purine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0006166	purine ribonucleoside salvage	IEP	Neighborhood
BP	GO:0006169	adenosine salvage	IEP	Neighborhood
BP	GO:0006349	regulation of gene expression by genetic imprinting	IEP	Neighborhood
BP	GO:0006637	acyl-CoA metabolic process	IEP	Neighborhood
BP	GO:0006656	phosphatidylcholine biosynthetic process	IEP	Neighborhood
BP	GO:0006730	one-carbon metabolic process	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006935	chemotaxis	IEP	Neighborhood
BP	GO:0007000	nucleolus organization	IEP	Neighborhood
BP	GO:0007017	microtubule-based process	IEP	Neighborhood
BP	GO:0007020	microtubule nucleation	IEP	Neighborhood
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	Neighborhood
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	Neighborhood
BP	GO:0007584	response to nutrient	IEP	Neighborhood
MF	GO:0008170	N-methyltransferase activity	IEP	Neighborhood
BP	GO:0008356	asymmetric cell division	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009117	nucleotide metabolic process	IEP	Neighborhood
BP	GO:0009119	ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009163	nucleoside biosynthetic process	IEP	Neighborhood
BP	GO:0009259	ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009292	genetic transfer	IEP	Neighborhood
BP	GO:0009294	DNA mediated transformation	IEP	Neighborhood
CC	GO:0009346	citrate lyase complex	IEP	Neighborhood
BP	GO:0009629	response to gravity	IEP	Neighborhood
BP	GO:0009956	radial pattern formation	IEP	Neighborhood
BP	GO:0009958	positive gravitropism	IEP	Neighborhood
MF	GO:0010011	auxin binding	IEP	Neighborhood
BP	GO:0010048	vernalization response	IEP	Neighborhood
BP	GO:0010053	root epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010103	stomatal complex morphogenesis	IEP	Neighborhood
BP	GO:0010152	pollen maturation	IEP	Neighborhood
BP	GO:0010160	formation of animal organ boundary	IEP	Neighborhood
BP	GO:0010183	pollen tube guidance	IEP	Neighborhood
MF	GO:0010329	auxin efflux transmembrane transporter activity	IEP	Neighborhood
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Neighborhood
BP	GO:0010540	basipetal auxin transport	IEP	Neighborhood
BP	GO:0010541	acropetal auxin transport	IEP	Neighborhood
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015929	hexosaminidase activity	IEP	Neighborhood
BP	GO:0016128	phytosteroid metabolic process	IEP	Neighborhood
BP	GO:0016129	phytosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016131	brassinosteroid metabolic process	IEP	Neighborhood
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016801	hydrolase activity, acting on ether bonds	IEP	Neighborhood
MF	GO:0016802	trialkylsulfonium hydrolase activity	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Neighborhood
MF	GO:0019206	nucleoside kinase activity	IEP	Neighborhood
BP	GO:0019637	organophosphate metabolic process	IEP	Neighborhood
BP	GO:0019693	ribose phosphate metabolic process	IEP	Neighborhood
BP	GO:0019695	choline metabolic process	IEP	Neighborhood
BP	GO:0021700	developmental maturation	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
BP	GO:0031670	cellular response to nutrient	IEP	Neighborhood
BP	GO:0032350	regulation of hormone metabolic process	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0035383	thioester metabolic process	IEP	Neighborhood
BP	GO:0035384	thioester biosynthetic process	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0040011	locomotion	IEP	Neighborhood
BP	GO:0040030	regulation of molecular function, epigenetic	IEP	Neighborhood
BP	GO:0042136	neurotransmitter biosynthetic process	IEP	Neighborhood
BP	GO:0042278	purine nucleoside metabolic process	IEP	Neighborhood
BP	GO:0042330	taxis	IEP	Neighborhood
BP	GO:0042425	choline biosynthetic process	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
BP	GO:0042446	hormone biosynthetic process	IEP	Neighborhood
BP	GO:0042451	purine nucleoside biosynthetic process	IEP	Neighborhood
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Neighborhood
MF	GO:0042562	hormone binding	IEP	Neighborhood
BP	GO:0043094	cellular metabolic compound salvage	IEP	Neighborhood
BP	GO:0043101	purine-containing compound salvage	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043174	nucleoside salvage	IEP	Neighborhood
CC	GO:0043224	nuclear SCF ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0043603	cellular amide metabolic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
BP	GO:0044764	multi-organism cellular process	IEP	Neighborhood
BP	GO:0045013	carbon catabolite repression of transcription	IEP	Neighborhood
BP	GO:0045014	carbon catabolite repression of transcription by glucose	IEP	Neighborhood
CC	GO:0045298	tubulin complex	IEP	Neighborhood
BP	GO:0045857	negative regulation of molecular function, epigenetic	IEP	Neighborhood
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	Neighborhood
BP	GO:0045990	carbon catabolite regulation of transcription	IEP	Neighborhood
BP	GO:0046015	regulation of transcription by glucose	IEP	Neighborhood
BP	GO:0046085	adenosine metabolic process	IEP	Neighborhood
BP	GO:0046086	adenosine biosynthetic process	IEP	Neighborhood
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0046129	purine ribonucleoside biosynthetic process	IEP	Neighborhood
BP	GO:0046470	phosphatidylcholine metabolic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
CC	GO:0046658	anchored component of plasma membrane	IEP	Neighborhood
BP	GO:0046683	response to organophosphorus	IEP	Neighborhood
BP	GO:0046686	response to cadmium ion	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0047560	3-dehydrosphinganine reductase activity	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0048364	root development	IEP	Neighborhood
BP	GO:0048437	floral organ development	IEP	Neighborhood
BP	GO:0048443	stamen development	IEP	Neighborhood
BP	GO:0048469	cell maturation	IEP	Neighborhood
BP	GO:0048528	post-embryonic root development	IEP	Neighborhood
BP	GO:0048764	trichoblast maturation	IEP	Neighborhood
BP	GO:0048765	root hair cell differentiation	IEP	Neighborhood
BP	GO:0048768	root hair cell tip growth	IEP	Neighborhood
BP	GO:0048827	phyllome development	IEP	Neighborhood
BP	GO:0048859	formation of anatomical boundary	IEP	Neighborhood
BP	GO:0050918	positive chemotaxis	IEP	Neighborhood
BP	GO:0051186	cofactor metabolic process	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051301	cell division	IEP	Neighborhood
BP	GO:0051513	regulation of monopolar cell growth	IEP	Neighborhood
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	Neighborhood
BP	GO:0055072	iron ion homeostasis	IEP	Neighborhood
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Neighborhood
BP	GO:0061984	catabolite repression	IEP	Neighborhood
BP	GO:0061985	carbon catabolite repression	IEP	Neighborhood
BP	GO:0061986	negative regulation of transcription by glucose	IEP	Neighborhood
BP	GO:0071258	cellular response to gravity	IEP	Neighborhood
BP	GO:0071514	genetic imprinting	IEP	Neighborhood
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	Neighborhood
BP	GO:0071695	anatomical structure maturation	IEP	Neighborhood
BP	GO:0072521	purine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0080094	response to trehalose-6-phosphate	IEP	Neighborhood
MF	GO:0080161	auxin transmembrane transporter activity	IEP	Neighborhood
BP	GO:0090626	plant epidermis morphogenesis	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:0090696	post-embryonic plant organ development	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011706	Cu-oxidase_2	384	513
IPR001117	Cu-oxidase	159	294
IPR011707	Cu-oxidase_3	32	145

External Links

No external refs found!

AT4G22010 (sks4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation