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  5. Pp3c17_2710V3.1

Pp3c17_2710V3.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG0004740 (Archaeplastida) Phylogenetic Tree(s): OG0004740_tree ,
OG_05_0005069 (LandPlants) Phylogenetic Tree(s): OG_05_0005069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_2710V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00112150 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane... 0.04 Archaeplastida
AT4G00800 No alias transducin family protein / WD-40 repeat family protein 0.15 Archaeplastida
Cre13.g606350 No alias No description available 0.06 Archaeplastida
GSVIVT01027438001 No alias Vesicle trafficking.target membrane... 0.05 Archaeplastida
Gb_27586 No alias CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.08 Archaeplastida
LOC_Os02g03220.1 No alias CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.02 Archaeplastida
MA_10428293g0010 No alias CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.05 Archaeplastida
MA_10432728g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_177428g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_37485g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
Mp8g08230.1 No alias CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.1 Archaeplastida
Smo441252 No alias Vesicle trafficking.target membrane... 0.02 Archaeplastida
Solyc05g044610.3.1 No alias CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.1 Archaeplastida
Zm00001e013515_P001 No alias CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!