- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RING/U-box superfamily protein
Gene families : OG0002546 (Archaeplastida) Phylogenetic Tree(s): OG0002546_tree ,
OG_05_0001754 (LandPlants) Phylogenetic Tree(s): OG_05_0001754_tree ,
OG_06_0001878 (SeedPlants) Phylogenetic Tree(s): OG_06_0001878_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G22250 | |
| Cluster | HCCA: Cluster_158 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005739 | mitochondrion | ISM | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000030 | mannosyltransferase activity | IEP | Neighborhood |
| BP | GO:0000105 | histidine biosynthetic process | IEP | Neighborhood |
| BP | GO:0000338 | protein deneddylation | IEP | Neighborhood |
| CC | GO:0000775 | chromosome, centromeric region | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0004124 | cysteine synthase activity | IEP | Neighborhood |
| MF | GO:0004161 | dimethylallyltranstransferase activity | IEP | Neighborhood |
| MF | GO:0004337 | geranyltranstransferase activity | IEP | Neighborhood |
| MF | GO:0004582 | dolichyl-phosphate beta-D-mannosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Neighborhood |
| MF | GO:0004635 | phosphoribosyl-AMP cyclohydrolase activity | IEP | Neighborhood |
| MF | GO:0004636 | phosphoribosyl-ATP diphosphatase activity | IEP | Neighborhood |
| MF | GO:0004686 | elongation factor-2 kinase activity | IEP | Neighborhood |
| MF | GO:0004844 | uracil DNA N-glycosylase activity | IEP | Neighborhood |
| CC | GO:0005697 | telomerase holoenzyme complex | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006261 | DNA-dependent DNA replication | IEP | Neighborhood |
| BP | GO:0006312 | mitotic recombination | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Neighborhood |
| BP | GO:0006547 | histidine metabolic process | IEP | Neighborhood |
| BP | GO:0006555 | methionine metabolic process | IEP | Neighborhood |
| BP | GO:0006626 | protein targeting to mitochondrion | IEP | Neighborhood |
| BP | GO:0007015 | actin filament organization | IEP | Neighborhood |
| BP | GO:0007155 | cell adhesion | IEP | Neighborhood |
| CC | GO:0008180 | COP9 signalosome | IEP | Neighborhood |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Neighborhood |
| CC | GO:0009330 | DNA topoisomerase complex (ATP-hydrolyzing) | IEP | Neighborhood |
| BP | GO:0010387 | COP9 signalosome assembly | IEP | Neighborhood |
| MF | GO:0010436 | carotenoid dioxygenase activity | IEP | Neighborhood |
| BP | GO:0010638 | positive regulation of organelle organization | IEP | Neighborhood |
| CC | GO:0016272 | prefoldin complex | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016573 | histone acetylation | IEP | Neighborhood |
| MF | GO:0016929 | SUMO-specific protease activity | IEP | Neighborhood |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Neighborhood |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Neighborhood |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Neighborhood |
| MF | GO:0019238 | cyclohydrolase activity | IEP | Neighborhood |
| BP | GO:0022610 | biological adhesion | IEP | Neighborhood |
| BP | GO:0030838 | positive regulation of actin filament polymerization | IEP | Neighborhood |
| BP | GO:0031334 | positive regulation of protein complex assembly | IEP | Neighborhood |
| CC | GO:0031501 | mannosyltransferase complex | IEP | Neighborhood |
| BP | GO:0032206 | positive regulation of telomere maintenance | IEP | Neighborhood |
| BP | GO:0032210 | regulation of telomere maintenance via telomerase | IEP | Neighborhood |
| BP | GO:0032212 | positive regulation of telomere maintenance via telomerase | IEP | Neighborhood |
| BP | GO:0032273 | positive regulation of protein polymerization | IEP | Neighborhood |
| CC | GO:0033185 | dolichol-phosphate-mannose synthase complex | IEP | Neighborhood |
| MF | GO:0042162 | telomeric DNA binding | IEP | Neighborhood |
| MF | GO:0043047 | single-stranded telomeric DNA binding | IEP | Neighborhood |
| BP | GO:0043966 | histone H3 acetylation | IEP | Neighborhood |
| BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0045010 | actin nucleation | IEP | Neighborhood |
| BP | GO:0045337 | farnesyl diphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0045338 | farnesyl diphosphate metabolic process | IEP | Neighborhood |
| MF | GO:0045549 | 9-cis-epoxycarotenoid dioxygenase activity | IEP | Neighborhood |
| BP | GO:0048449 | floral organ formation | IEP | Neighborhood |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | Neighborhood |
| BP | GO:0051054 | positive regulation of DNA metabolic process | IEP | Neighborhood |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0060359 | response to ammonium ion | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | Neighborhood |
| CC | GO:0071944 | cell periphery | IEP | Neighborhood |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Neighborhood |
| BP | GO:0097435 | supramolecular fiber organization | IEP | Neighborhood |
| MF | GO:0097506 | deaminated base DNA N-glycosylase activity | IEP | Neighborhood |
| MF | GO:0098847 | sequence-specific single stranded DNA binding | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Neighborhood |
| BP | GO:1904356 | regulation of telomere maintenance via telomere lengthening | IEP | Neighborhood |
| BP | GO:1904358 | positive regulation of telomere maintenance via telomere lengthening | IEP | Neighborhood |
| BP | GO:1905393 | plant organ formation | IEP | Neighborhood |
| BP | GO:2000278 | regulation of DNA biosynthetic process | IEP | Neighborhood |
| BP | GO:2000573 | positive regulation of DNA biosynthetic process | IEP | Neighborhood |
| BP | GO:2001252 | positive regulation of chromosome organization | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |