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  5. Pp3c18_16800V3.1

Pp3c18_16800V3.1


Description : ADP-ribosylation factor A1B


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_16800V3.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AT2G15310 ATARFB1A, ARFB1A ADP-ribosylation factor B1A 0.06 Archaeplastida
AT5G17060 ATARFB1B, ARFB1B ADP-ribosylation factor B1B 0.02 Archaeplastida
GSVIVT01013765001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01032451001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Gb_01291 No alias ARF-GTPase 0.03 Archaeplastida
LOC_Os06g02390.1 No alias ARF-GTPase 0.02 Archaeplastida
Mp2g14560.1 No alias ARF-GTPase 0.02 Archaeplastida
Solyc02g092970.3.1 No alias ARF-GTPase 0.02 Archaeplastida
Zm00001e036138_P002 No alias ARF-GTPase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 8 176
No external refs found!