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  5. Pp3c18_18090V3.1

Pp3c18_18090V3.1


Description : Clathrin adaptor complexes medium subunit family protein


Gene families : OG0002925 (Archaeplastida) Phylogenetic Tree(s): OG0002925_tree ,
OG_05_0003255 (LandPlants) Phylogenetic Tree(s): OG_05_0003255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_18090V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00250090 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 Archaeplastida
AT1G60780 HAP13 Clathrin adaptor complexes medium subunit family protein 0.07 Archaeplastida
Cpa|evm.model.tig00021181.5 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
Cre06.g262250 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 Archaeplastida
GSVIVT01004093001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.08 Archaeplastida
LOC_Os05g46550.1 No alias medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
MA_640862g0010 No alias AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp1g15960.1 No alias medium subunit mu of AP-1 trans-Golgi network cargo... 0.05 Archaeplastida
Smo91068 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 Archaeplastida
Solyc04g026360.3.1 No alias AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc04g026380.4.1 No alias AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc05g013340.3.1 No alias medium subunit mu of AP-1 trans-Golgi network cargo... 0.07 Archaeplastida
Zm00001e020037_P003 No alias AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e028137_P005 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!