1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c18_6870V3.1

Pp3c18_6870V3.1


Description : ribosome recycling factor, chloroplast precursor


Gene families : OG0002064 (Archaeplastida) Phylogenetic Tree(s): OG0002064_tree ,
OG_05_0006912 (LandPlants) Phylogenetic Tree(s): OG_05_0006912_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_6870V3.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00070570 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 Archaeplastida
AT3G63190 AtcpRRF, HFP108,... ribosome recycling factor, chloroplast precursor 0.04 Archaeplastida
Cpa|evm.model.tig00021489.22 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Cre03.g156050 No alias Protein biosynthesis.organelle translation... 0.06 Archaeplastida
GSVIVT01001148001 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Gb_31542 No alias RRF translation ribosome recycling factor 0.02 Archaeplastida
LOC_Os07g38300.1 No alias RRF translation ribosome recycling factor 0.04 Archaeplastida
MA_452248g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9873316g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g14000.1 No alias RRF translation ribosome recycling factor 0.05 Archaeplastida
Solyc09g065270.3.1 No alias RRF translation ribosome recycling factor 0.05 Archaeplastida
Zm00001e021862_P002 No alias RRF translation ribosome recycling factor 0.04 Archaeplastida
Zm00001e029168_P003 No alias RRF translation ribosome recycling factor 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 100 261
No external refs found!