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  5. Pp3c19_21200V3.1

Pp3c19_21200V3.1


Description : Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like


Gene families : OG0000950 (Archaeplastida) Phylogenetic Tree(s): OG0000950_tree ,
OG_05_0000673 (LandPlants) Phylogenetic Tree(s): OG_05_0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_21200V3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00247540 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 Archaeplastida
AT1G70190 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.06 Archaeplastida
AT3G06040 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 Archaeplastida
AT4G36420 No alias Ribosomal protein L12 family protein 0.07 Archaeplastida
AT4G37660 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.06 Archaeplastida
Cpa|evm.model.tig00020704.55 No alias 50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea 0.01 Archaeplastida
Gb_26365 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.04 Archaeplastida
LOC_Os02g10540.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida
LOC_Os05g48050.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.02 Archaeplastida
MA_137800g0010 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.08 Archaeplastida
Mp1g23110.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.04 Archaeplastida
Solyc02g031970.1.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.05 Archaeplastida
Solyc02g088760.2.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida
Solyc02g092300.1.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.05 Archaeplastida
Solyc09g010030.3.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.06 Archaeplastida
Zm00001e026468_P001 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!