AT4G24060


Description : Dof-type zinc finger DNA-binding family protein


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G24060
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.08 Archaeplastida
AMTR_s00058p00210070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00169p00055880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.02 Archaeplastida
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01007758001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01021085001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01025119001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01034189001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_07805 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os01g48290.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os01g64590.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.07 Archaeplastida
LOC_Os08g38220.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_2430g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_56828g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_74014g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Pp3c17_3860V3.1 No alias OBF binding protein 4 0.03 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.03 Archaeplastida
Solyc01g096120.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc02g065290.1.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.12 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc03g082840.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.1 Archaeplastida
Solyc03g115940.4.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc04g070960.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc05g054510.2.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc06g062520.1.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc06g069760.3.1 No alias transcription factor (DOF) 0.01 Archaeplastida
Solyc06g071480.3.1 No alias transcription factor (DOF) 0.09 Archaeplastida
Solyc06g075370.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.08 Archaeplastida
Solyc08g082910.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.08 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc11g066050.1.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc11g072500.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e003086_P001 No alias transcription factor (DOF) 0.01 Archaeplastida
Zm00001e004809_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e006527_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e010022_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e010454_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e018163_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.08 Archaeplastida
Zm00001e023334_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e027634_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e038479_P002 No alias transcription factor (DOF) 0.01 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004557 alpha-galactosidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
BP GO:0006672 ceramide metabolic process IEP Neighborhood
BP GO:0006677 glycosylceramide metabolic process IEP Neighborhood
BP GO:0006687 glycosphingolipid metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007020 microtubule nucleation IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009956 radial pattern formation IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010065 primary meristem tissue development IEP Neighborhood
BP GO:0010067 procambium histogenesis IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010623 programmed cell death involved in cell development IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016137 glycoside metabolic process IEP Neighborhood
BP GO:0016139 glycoside catabolic process IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017040 N-acylsphingosine amidohydrolase activity IEP Neighborhood
BP GO:0019377 glycolipid catabolic process IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0030149 sphingolipid catabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032881 regulation of polysaccharide metabolic process IEP Neighborhood
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
CC GO:0045298 tubulin complex IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0045597 positive regulation of cell differentiation IEP Neighborhood
BP GO:0045930 negative regulation of mitotic cell cycle IEP Neighborhood
BP GO:0046466 membrane lipid catabolic process IEP Neighborhood
BP GO:0046477 glycosylceramide catabolic process IEP Neighborhood
BP GO:0046479 glycosphingolipid catabolic process IEP Neighborhood
BP GO:0046514 ceramide catabolic process IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:1900030 regulation of pectin biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 50 107
No external refs found!