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  5. AT4G24120

AT4G24120 (ATYSL1, YSL1)


Aliases : ATYSL1, YSL1

Description : YELLOW STRIPE like 1


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0000331 (LandPlants) Phylogenetic Tree(s): OG_05_0000331_tree ,
OG_06_0001892 (SeedPlants) Phylogenetic Tree(s): OG_06_0001892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G24120
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00045420 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.03 Archaeplastida
AMTR_s00029p00088380 evm_27.TU.AmTr_v1... Probable metal-nicotianamine transporter YSL5... 0.02 Archaeplastida
AMTR_s00029p00090440 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.03 Archaeplastida
AMTR_s00154p00062710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 Archaeplastida
AMTR_s00154p00064240 evm_27.TU.AmTr_v1... Probable metal-nicotianamine transporter YSL6... 0.03 Archaeplastida
AMTR_s00154p00064710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 Archaeplastida
AT5G24380 ATYSL2, YSL2 YELLOW STRIPE like 2 0.01 Archaeplastida
GSVIVT01012035001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
GSVIVT01012036001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.01 Archaeplastida
GSVIVT01029349001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
Gb_23122 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Gb_27981 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Gb_27988 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Gb_40333 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Gb_41263 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
LOC_Os02g42220.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_10431747g0010 No alias Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.01 Archaeplastida
MA_110581g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_46073g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.05 Archaeplastida
MA_5416460g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g01710.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Pp3c1_9680V3.1 No alias YELLOW STRIPE like 6 0.02 Archaeplastida
Pp3c2_34990V3.1 No alias YELLOW STRIPE like 6 0.04 Archaeplastida
Zm00001e007544_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e015193_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Zm00001e023053_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e031577_P001 No alias Probable metal-nicotianamine transporter YSL16 OS=Oryza... 0.03 Archaeplastida
Zm00001e033936_P001 No alias Probable metal-nicotianamine transporter YSL16 OS=Oryza... 0.03 Archaeplastida
Zm00001e041266_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IGI Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006857 oligopeptide transport ISS Interproscan
BP GO:0010039 response to iron ion IEP Interproscan
BP GO:0048316 seed development IGI Interproscan
MF GO:0051980 iron-nicotianamine transmembrane transporter activity IGI Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002215 defense response to nematode IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0003988 acetyl-CoA C-acyltransferase activity IEP Neighborhood
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP Neighborhood
MF GO:0004029 aldehyde dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004300 enoyl-CoA hydratase activity IEP Neighborhood
MF GO:0004301 epoxide hydrolase activity IEP Neighborhood
MF GO:0004445 inositol-polyphosphate 5-phosphatase activity IEP Neighborhood
MF GO:0004506 squalene monooxygenase activity IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004575 sucrose alpha-glucosidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004733 pyridoxamine-phosphate oxidase activity IEP Neighborhood
MF GO:0004829 threonine-tRNA ligase activity IEP Neighborhood
MF GO:0005350 pyrimidine nucleobase transmembrane transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005513 detection of calcium ion IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
CC GO:0005955 calcineurin complex IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0005987 sucrose catabolic process IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006435 threonyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006714 sesquiterpenoid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006971 hypotonic response IEP Neighborhood
BP GO:0007623 circadian rhythm IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008614 pyridoxine metabolic process IEP Neighborhood
BP GO:0008615 pyridoxine biosynthetic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009299 mRNA transcription IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009313 oligosaccharide catabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009413 response to flooding IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
CC GO:0009503 thylakoid light-harvesting complex IEP Neighborhood
CC GO:0009517 PSII associated light-harvesting complex II IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0009819 drought recovery IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009908 flower development IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010117 photoprotection IEP Neighborhood
BP GO:0010205 photoinhibition IEP Neighborhood
BP GO:0010254 nectary development IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0010334 sesquiterpene synthase activity IEP Neighborhood
BP GO:0010466 negative regulation of peptidase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0010555 response to mannitol IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010951 negative regulation of endopeptidase activity IEP Neighborhood
MF GO:0015099 nickel cation transmembrane transporter activity IEP Neighborhood
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015210 uracil transmembrane transporter activity IEP Neighborhood
MF GO:0015391 nucleobase:cation symporter activity IEP Neighborhood
MF GO:0015505 uracil:cation symporter activity IEP Neighborhood
BP GO:0015675 nickel cation transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Neighborhood
BP GO:0016122 xanthophyll metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016207 4-coumarate-CoA ligase activity IEP Neighborhood
MF GO:0016405 CoA-ligase activity IEP Neighborhood
MF GO:0016408 C-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Neighborhood
MF GO:0016803 ether hydrolase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016878 acid-thiol ligase activity IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019605 butyrate metabolic process IEP Neighborhood
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP Neighborhood
BP GO:0030007 cellular potassium ion homeostasis IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
CC GO:0031977 thylakoid lumen IEP Neighborhood
BP GO:0032928 regulation of superoxide anion generation IEP Neighborhood
MF GO:0034002 (R)-limonene synthase activity IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
MF GO:0034768 (E)-beta-ocimene synthase activity IEP Neighborhood
BP GO:0042214 terpene metabolic process IEP Neighborhood
BP GO:0042539 hypotonic salinity response IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
BP GO:0042816 vitamin B6 metabolic process IEP Neighborhood
BP GO:0042817 pyridoxal metabolic process IEP Neighborhood
BP GO:0042819 vitamin B6 biosynthetic process IEP Neighborhood
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043692 monoterpene metabolic process IEP Neighborhood
BP GO:0043693 monoterpene biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0045596 negative regulation of cell differentiation IEP Neighborhood
BP GO:0045861 negative regulation of proteolysis IEP Neighborhood
MF GO:0046030 inositol trisphosphate phosphatase activity IEP Neighborhood
BP GO:0046246 terpene biosynthetic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046352 disaccharide catabolic process IEP Neighborhood
BP GO:0046459 short-chain fatty acid metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0047617 acyl-CoA hydrolase activity IEP Neighborhood
MF GO:0047760 butyrate-CoA ligase activity IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048479 style development IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048497 maintenance of floral organ identity IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048511 rhythmic process IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
MF GO:0050550 pinene synthase activity IEP Neighborhood
MF GO:0050551 myrcene synthase activity IEP Neighborhood
MF GO:0050552 (4S)-limonene synthase activity IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0051761 sesquiterpene metabolic process IEP Neighborhood
BP GO:0051762 sesquiterpene biosynthetic process IEP Neighborhood
BP GO:0052547 regulation of peptidase activity IEP Neighborhood
BP GO:0052548 regulation of endopeptidase activity IEP Neighborhood
MF GO:0052745 inositol phosphate phosphatase activity IEP Neighborhood
BP GO:0055075 potassium ion homeostasis IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0071836 nectar secretion IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072708 response to sorbitol IEP Neighborhood
MF GO:0080015 sabinene synthase activity IEP Neighborhood
BP GO:0080086 stamen filament development IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090322 regulation of superoxide metabolic process IEP Neighborhood
MF GO:0090599 alpha-glucosidase activity IEP Neighborhood
BP GO:0090700 maintenance of plant organ identity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1902347 response to strigolactone IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905156 negative regulation of photosynthesis IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004813 OPT 46 657
No external refs found!