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  5. Pp3c1_12560V3.1

Pp3c1_12560V3.1


Description : TRAF-like family protein


Gene families : OG0004673 (Archaeplastida) Phylogenetic Tree(s): OG0004673_tree ,
OG_05_0003798 (LandPlants) Phylogenetic Tree(s): OG_05_0003798_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_12560V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00122030 evm_27.TU.AmTr_v1... Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G25320 No alias TRAF-like family protein 0.05 Archaeplastida
GSVIVT01015601001 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01035878001 No alias Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os02g39990.1 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_10430470g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10432878g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10434824g0010 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis... 0.02 Archaeplastida
MA_24634g0010 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis... 0.02 Archaeplastida
MA_9624g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c2_25330V3.1 No alias TRAF-like family protein 0.03 Archaeplastida
Smo173767 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.07 Archaeplastida
Solyc06g017970.4.1 No alias Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e022965_P001 No alias Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!