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  5. Pp3c1_27020V3.1

Pp3c1_27020V3.1


Description : phytoene desaturation 1


Gene families : OG0002988 (Archaeplastida) Phylogenetic Tree(s): OG0002988_tree ,
OG_05_0003715 (LandPlants) Phylogenetic Tree(s): OG_05_0003715_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_27020V3.1
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AT1G06570 HPD, PDS1 phytoene desaturation 1 0.03 Archaeplastida
Cpa|evm.model.tig00000718.8 No alias Redox homeostasis.low-molecular-weight... 0.01 Archaeplastida
Cre09.g399030 No alias Redox homeostasis.low-molecular-weight... 0.02 Archaeplastida
Mp4g19560.1 No alias 4-hydroxyphenylpyruvate dioxygenase (HPPD) 0.02 Archaeplastida
Smo165961 No alias Redox homeostasis.low-molecular-weight... 0.02 Archaeplastida
Solyc05g041200.4.1 No alias 4-hydroxyphenylpyruvate dioxygenase (HPPD) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!