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  5. Pp3c1_32770V3.1

Pp3c1_32770V3.1


Description : plant U-box 38


Gene families : OG0003551 (Archaeplastida) Phylogenetic Tree(s): OG0003551_tree ,
OG_05_0002338 (LandPlants) Phylogenetic Tree(s): OG_05_0002338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_32770V3.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Gb_13006 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
LOC_Os06g13090.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
MA_17520g0010 No alias E3 ubiquitin ligase (PUB) 0.01 Archaeplastida
Mp1g18000.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!