Pp3c1_41130V3.1


Description : No annotation


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0009090 (LandPlants) Phylogenetic Tree(s): OG_05_0009090_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_41130V3.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Gb_02281 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.01 Archaeplastida
Gb_09393 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.01 Archaeplastida
Gb_14700 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_20325 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Gb_22750 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_23759 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Gb_33106 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Gb_33301 No alias Uncharacterized mitochondrial protein AtMg00860... 0.02 Archaeplastida
Gb_36033 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_39593 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.01 Archaeplastida
Pp3c17_2370V3.1 No alias DNA/RNA polymerases superfamily protein 0.05 Archaeplastida
Pp3c2_1000V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c3_35120V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c5_12720V3.1 No alias DNA/RNA polymerases superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006313 transposition, DNA-mediated IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0032196 transposition IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!