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  5. Pp3c1_60V3.1

Pp3c1_60V3.1


Description : double-stranded RNA binding protein-related / DsRBD protein-related


Gene families : OG0004364 (Archaeplastida) Phylogenetic Tree(s): OG0004364_tree ,
OG_05_0004548 (LandPlants) Phylogenetic Tree(s): OG_05_0004548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_60V3.1
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00120100 evm_27.TU.AmTr_v1... RNA biosynthesis.siRNA biogenesis.HEN1 siRNA methyltransferase 0.03 Archaeplastida
AT4G20910 HEN1, CRM2 double-stranded RNA binding protein-related / DsRBD... 0.03 Archaeplastida
AT4G20920 No alias double-stranded RNA-binding domain (DsRBD)-containing protein 0.02 Archaeplastida
MA_468458g0010 No alias miRNA/siRNA methyltransferase (HEN1). protein folding... 0.02 Archaeplastida
Zm00001e034681_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!