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  5. Pp3c20_16550V3.1

Pp3c20_16550V3.1


Description : clathrin adaptor complexes medium subunit family protein


Gene families : OG0002568 (Archaeplastida) Phylogenetic Tree(s): OG0002568_tree ,
OG_05_0003021 (LandPlants) Phylogenetic Tree(s): OG_05_0003021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_16550V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00109690 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
AT5G05010 No alias clathrin adaptor complexes medium subunit family protein 0.07 Archaeplastida
Cre02.g089100 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
GSVIVT01012108001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.11 Archaeplastida
Gb_08194 No alias subunit delta of cargo adaptor F-subcomplex 0.05 Archaeplastida
LOC_Os05g24601.1 No alias subunit delta of cargo adaptor F-subcomplex 0.14 Archaeplastida
MA_20701g0020 No alias Coatomer subunit delta-2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_7657529g0010 No alias subunit delta of cargo adaptor F-subcomplex 0.06 Archaeplastida
Mp3g04840.1 No alias subunit delta of cargo adaptor F-subcomplex 0.06 Archaeplastida
Smo172790 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.1 Archaeplastida
Solyc01g103480.3.1 No alias subunit delta of cargo adaptor F-subcomplex 0.12 Archaeplastida
Zm00001e018368_P003 No alias subunit delta of cargo adaptor F-subcomplex 0.07 Archaeplastida
Zm00001e039766_P001 No alias subunit delta of cargo adaptor F-subcomplex 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!