Pp3c20_19210V3.1

Description : zinc finger (C3HC4-type RING finger) family protein

Gene families : OG0002694 (Archaeplastida) Phylogenetic Tree(s): OG0002694_tree ,
OG_05_0003072 (LandPlants) Phylogenetic Tree(s): OG_05_0003072_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c20_19210V3.1
Cluster	HCCA: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01013625001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.02	Archaeplastida
MA_2413g0010	No alias	no description available(sp\|o80996\|briz2_arath : 127.0)	0.02	Archaeplastida
Mp3g06680.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001607	Znf_UBP	259	318
IPR001841	Znf_RING	207	248
IPR011422	BRAP2	99	195

External Links

No external refs found!