Pp3c20_22230V3.1

Description : Disease resistance protein (TIR-NBS-LRR class) family

Gene families : OG0004902 (Archaeplastida) Phylogenetic Tree(s): OG0004902_tree ,
OG_05_0003383 (LandPlants) Phylogenetic Tree(s): OG_05_0003383_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c20_22230V3.1
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
Pp3c10_19120V3.1	No alias	disease resistance protein (TIR-NBS-LRR class)	0.04	Archaeplastida
Pp3c10_20790V3.1	No alias	disease resistance protein (TIR-NBS-LRR class)	0.03	Archaeplastida
Pp3c2_17200V3.1	No alias	No annotation	0.02	Archaeplastida
Pp3c2_2620V3.1	No alias	Protein kinase family protein	0.03	Archaeplastida
Pp3c6_12950V3.1	No alias	Concanavalin A-like lectin protein kinase family protein	0.02	Archaeplastida
Pp3c7_1030V3.1	No alias	Protein kinase family protein	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	2	111

External Links

No external refs found!