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  5. Pp3c20_2790V3.1

Pp3c20_2790V3.1


Description : plastid transcriptionally active 18


Gene families : OG0001063 (Archaeplastida) Phylogenetic Tree(s): OG0001063_tree ,
OG_05_0006615 (LandPlants) Phylogenetic Tree(s): OG_05_0006615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_2790V3.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT2G32180 PTAC18 plastid transcriptionally active 18 0.04 Archaeplastida
AT2G32650 No alias RmlC-like cupins superfamily protein 0.07 Archaeplastida
Cpa|evm.model.tig00000851.18 No alias No description available 0.01 Archaeplastida
Cre01.g013150 No alias No description available 0.02 Archaeplastida
GSVIVT01030485001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 Archaeplastida
LOC_Os02g54360.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.03 Archaeplastida
Solyc07g049230.1.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.06 Archaeplastida
Zm00001e040949_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!