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  5. Pp3c20_3310V3.1

Pp3c20_3310V3.1


Description : No annotation


Gene families : OG0007163 (Archaeplastida) Phylogenetic Tree(s): OG0007163_tree ,
OG_05_0005143 (LandPlants) Phylogenetic Tree(s): OG_05_0005143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_3310V3.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Pp3c15_19410V3.1 No alias DNA-directed RNA polymerase family protein 0.05 Archaeplastida
Pp3c16_10710V3.1 No alias DNA-directed RNA polymerase family protein 0.04 Archaeplastida
Pp3c16_6070V3.1 No alias DNA-directed RNA polymerase family protein 0.04 Archaeplastida
Pp3c17_12270V3.1 No alias DNA-directed RNA polymerase family protein 0.05 Archaeplastida
Pp3c21_8540V3.1 No alias nuclear RNA polymerase C2 0.04 Archaeplastida
Pp3c24_8970V3.1 No alias DNA-directed RNA polymerase family protein 0.06 Archaeplastida
Pp3c3_37780V3.1 No alias DNA-directed RNA polymerase family protein 0.05 Archaeplastida
Pp3c4_14800V3.1 No alias DNA-directed RNA polymerase family protein 0.06 Archaeplastida
Pp3c4_24950V3.1 No alias nuclear RNA polymerase C2 0.06 Archaeplastida
Pp3c5_1420V3.1 No alias nuclear RNA polymerase C2 0.05 Archaeplastida
Pp3c5_18580V3.1 No alias nuclear RNA polymerase A2 0.07 Archaeplastida
Pp3c7_1680V3.1 No alias DNA-directed RNA polymerase family protein 0.02 Archaeplastida
Pp3c9_12670V3.1 No alias DNA-directed RNA polymerase family protein 0.06 Archaeplastida
Pp3c9_12710V3.1 No alias DNA-directed RNA polymerase family protein 0.05 Archaeplastida
Pp3c9_17790V3.1 No alias DNA-directed RNA polymerase family protein 0.05 Archaeplastida
Pp3s67_170V3.1 No alias DNA-directed RNA polymerase family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006313 transposition, DNA-mediated IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0032196 transposition IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!