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  5. Pp3c20_5690V3.1

Pp3c20_5690V3.1


Description : eukaryotic translation initiation factor 3E


Gene families : OG0002938 (Archaeplastida) Phylogenetic Tree(s): OG0002938_tree ,
OG_05_0005555 (LandPlants) Phylogenetic Tree(s): OG_05_0005555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_5690V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00062980 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 Archaeplastida
AT3G57290 TIF3E1, INT6,... eukaryotic translation initiation factor 3E 0.08 Archaeplastida
Cpa|evm.model.tig00000093.43 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
Cre12.g498100 No alias Protein biosynthesis.translation... 0.04 Archaeplastida
GSVIVT01005045001 No alias Protein biosynthesis.translation... 0.05 Archaeplastida
Gb_40126 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.01 Archaeplastida
LOC_Os07g12110.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.07 Archaeplastida
MA_7274g0020 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.06 Archaeplastida
Mp3g01990.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Smo269977 No alias Protein biosynthesis.translation... 0.06 Archaeplastida
Solyc10g079880.2.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.07 Archaeplastida
Zm00001e009393_P005 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.13 Archaeplastida
Zm00001e033116_P002 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!