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  5. AT4G27050

AT4G27050


Description : F-box/RNI-like superfamily protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27050
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AT1G19070 No alias F-box family protein 0.03 Archaeplastida
AT1G47920 No alias RNI-like superfamily protein 0.06 Archaeplastida
AT2G29930 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G58875 No alias No description available 0.06 Archaeplastida
AT3G59160 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G59240 No alias RNI-like superfamily protein 0.03 Archaeplastida
AT4G13960 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT5G15620 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0004632 phosphopantothenate--cysteine ligase activity IEP Neighborhood
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008517 folic acid transmembrane transporter activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
BP GO:0015884 folic acid transport IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0051180 vitamin transport IEP Neighborhood
BP GO:0051181 cofactor transport IEP Neighborhood
BP GO:0072337 modified amino acid transport IEP Neighborhood
MF GO:0072349 modified amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0090482 vitamin transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 171 196
IPR001810 F-box_dom 5 40
No external refs found!