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  5. Pp3c21_1500V3.1

Pp3c21_1500V3.1


Description : GTP binding Elongation factor Tu family protein


Gene families : OG0001561 (Archaeplastida) Phylogenetic Tree(s): OG0001561_tree ,
OG_05_0005338 (LandPlants) Phylogenetic Tree(s): OG_05_0005338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_1500V3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00115820 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 Archaeplastida
AT4G02930 No alias GTP binding Elongation factor Tu family protein 0.09 Archaeplastida
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Gb_17545 No alias EF-Tu translation elongation factor 0.06 Archaeplastida
LOC_Os03g63410.1 No alias EF-Tu translation elongation factor 0.04 Archaeplastida
MA_58335g0010 No alias EF-Tu translation elongation factor 0.06 Archaeplastida
Mp1g14750.1 No alias EF-Tu translation elongation factor 0.09 Archaeplastida
Smo153081 No alias Protein biosynthesis.organelle translation... 0.03 Archaeplastida
Solyc06g008940.4.1 No alias EF-Tu translation elongation factor 0.06 Archaeplastida
Solyc09g073000.3.1 No alias EF-Tu translation elongation factor 0.02 Archaeplastida
Zm00001e006373_P001 No alias EF-Tu translation elongation factor 0.08 Archaeplastida
Zm00001e011649_P001 No alias EF-Tu translation elongation factor 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!