Coexpression cluster: Cluster_114 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090501 RNA phosphodiester bond hydrolysis 0.83% (1/120) 8.08 0.003697 0.02756
GO:0090305 nucleic acid phosphodiester bond hydrolysis 0.83% (1/120) 8.08 0.003697 0.02756
GO:0000469 cleavage involved in rRNA processing 0.83% (1/120) 8.08 0.003697 0.02756
GO:0004146 dihydrofolate reductase activity 0.83% (1/120) 8.08 0.003697 0.02756
GO:0046654 tetrahydrofolate biosynthetic process 0.83% (1/120) 8.08 0.003697 0.02756
GO:0046653 tetrahydrofolate metabolic process 0.83% (1/120) 8.08 0.003697 0.02756
GO:0042559 pteridine-containing compound biosynthetic process 0.83% (1/120) 8.08 0.003697 0.02756
GO:0042558 pteridine-containing compound metabolic process 0.83% (1/120) 8.08 0.003697 0.02756
GO:0009396 folic acid-containing compound biosynthetic process 0.83% (1/120) 8.08 0.003697 0.02756
GO:0006760 folic acid-containing compound metabolic process 0.83% (1/120) 8.08 0.003697 0.02756
GO:0032507 maintenance of protein location in cell 0.83% (1/120) 7.08 0.007381 0.031853
GO:0000428 DNA-directed RNA polymerase complex 0.83% (1/120) 7.08 0.007381 0.031853
GO:0051651 maintenance of location in cell 0.83% (1/120) 7.08 0.007381 0.031853
GO:0006575 cellular modified amino acid metabolic process 0.83% (1/120) 7.08 0.007381 0.031853
GO:0005666 RNA polymerase III complex 0.83% (1/120) 7.08 0.007381 0.031853
GO:0006383 transcription by RNA polymerase III 0.83% (1/120) 7.08 0.007381 0.031853
GO:0046923 ER retention sequence binding 0.83% (1/120) 7.08 0.007381 0.031853
GO:0045185 maintenance of protein location 0.83% (1/120) 7.08 0.007381 0.031853
GO:0055029 nuclear DNA-directed RNA polymerase complex 0.83% (1/120) 7.08 0.007381 0.031853
GO:0035437 maintenance of protein localization in endoplasmic reticulum 0.83% (1/120) 7.08 0.007381 0.031853
GO:0042398 cellular modified amino acid biosynthetic process 0.83% (1/120) 7.08 0.007381 0.031853
GO:0006621 protein retention in ER lumen 0.83% (1/120) 7.08 0.007381 0.031853
GO:0072595 maintenance of protein localization in organelle 0.83% (1/120) 7.08 0.007381 0.031853
GO:0043603 cellular amide metabolic process 4.17% (5/120) 2.42 0.002503 0.037321
GO:0009987 cellular process 9.17% (11/120) 1.5 0.001837 0.037664
GO:0071704 organic substance metabolic process 7.5% (9/120) 1.35 0.009074 0.038159
GO:0043604 amide biosynthetic process 4.17% (5/120) 2.45 0.002336 0.038315
GO:0044260 cellular macromolecule metabolic process 5.83% (7/120) 1.58 0.009454 0.03876
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 0.83% (1/120) 6.08 0.014707 0.038903
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 0.83% (1/120) 6.08 0.014707 0.038903
GO:0005198 structural molecule activity 3.33% (4/120) 2.07 0.015628 0.03943
GO:0003735 structural constituent of ribosome 3.33% (4/120) 2.13 0.013706 0.039436
GO:1990904 ribonucleoprotein complex 3.33% (4/120) 2.11 0.014266 0.039654
GO:0016070 RNA metabolic process 2.5% (3/120) 2.54 0.015284 0.039788
GO:0006518 peptide metabolic process 3.33% (4/120) 2.11 0.014078 0.039806
GO:1901362 organic cyclic compound biosynthetic process 2.5% (3/120) 2.6 0.013604 0.039839
GO:0044237 cellular metabolic process 8.33% (10/120) 1.56 0.002187 0.039851
GO:0044424 intracellular part 5.0% (6/120) 1.6 0.014604 0.039917
GO:0044464 cell part 5.0% (6/120) 1.58 0.015602 0.03998
GO:0030880 RNA polymerase complex 0.83% (1/120) 6.49 0.011051 0.040273
GO:0061695 transferase complex, transferring phosphorus-containing groups 0.83% (1/120) 6.49 0.011051 0.040273
GO:0005048 signal sequence binding 0.83% (1/120) 6.49 0.011051 0.040273
GO:0042277 peptide binding 0.83% (1/120) 6.49 0.011051 0.040273
GO:0051235 maintenance of location 0.83% (1/120) 6.49 0.011051 0.040273
GO:0043228 non-membrane-bounded organelle 3.33% (4/120) 2.13 0.013523 0.040323
GO:0043232 intracellular non-membrane-bounded organelle 3.33% (4/120) 2.13 0.013523 0.040323
GO:0005840 ribosome 3.33% (4/120) 2.2 0.011444 0.040799
GO:0009059 macromolecule biosynthetic process 5.0% (6/120) 2.25 0.001749 0.040985
GO:0043043 peptide biosynthetic process 3.33% (4/120) 2.14 0.013341 0.041282
GO:0006412 translation 3.33% (4/120) 2.14 0.013341 0.041282
GO:0008152 metabolic process 8.33% (10/120) 1.13 0.016664 0.041409
GO:0006725 cellular aromatic compound metabolic process 3.33% (4/120) 2.16 0.01263 0.041425
GO:0044271 cellular nitrogen compound biosynthetic process 5.83% (7/120) 2.34 0.000506 0.041455
GO:0018130 heterocycle biosynthetic process 2.5% (3/120) 2.64 0.012545 0.041987
GO:0019438 aromatic compound biosynthetic process 2.5% (3/120) 2.66 0.012034 0.041992
GO:1901360 organic cyclic compound metabolic process 3.33% (4/120) 2.14 0.013161 0.042321
GO:0046483 heterocycle metabolic process 3.33% (4/120) 2.17 0.012455 0.042556
GO:1901566 organonitrogen compound biosynthetic process 4.17% (5/120) 2.13 0.006004 0.042812
GO:0043170 macromolecule metabolic process 6.67% (8/120) 1.55 0.006273 0.042867
GO:0009058 biosynthetic process 5.83% (7/120) 2.04 0.001652 0.045159
GO:0032991 protein-containing complex 5.0% (6/120) 1.83 0.00709 0.046513
GO:0005575 cellular_component 5.83% (7/120) 1.36 0.020008 0.048975
GO:0006807 nitrogen compound metabolic process 7.5% (9/120) 1.56 0.003587 0.049026
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.078 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.046 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_228 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_233 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_263 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_131 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_167 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_248 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.064 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_86 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_201 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_328 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_85 0.035 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.066 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_179 0.052 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_239 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_423 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_427 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.084 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.057 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_333 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_7 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_142 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.074 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.039 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_218 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.061 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_87 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.042 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_17 0.035 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.046 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.036 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_118 0.03 Archaeplastida Compare
Sequences (120) (download table)

InterPro Domains

GO Terms

Family Terms